BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E09SP1|AL426382
(766 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig141 904 0.0
3x_Contig1591 152 8e-37
>3x_Contig141
Length = 808
Score = 904 bits (445), Expect = 0.0
Identities = 498/531 (93%), Gaps = 1/531 (0%)
Strand = Plus / Minus
Query: 3 ccggtaaaaatgacgtcttttgagaacagaattcagggttcagagaacgggtcagtgtct 62
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||
Sbjct: 530 ccggtaaaaatgacgtcttttgagaacagacttcagggttcagacaacgggtcagtttct 471
Query: 63 gacgatwacgakgggcataagasgctactcaaagcacctggssaaaaasaccaagatgtg 122
|||||| |||| | |||||||| |||||||||||||||||| ||||| |||||||||||
Sbjct: 470 gacgattacgatgtgcataagacgctactcaaagcacctggccaaaaacaccaagatgtg 411
Query: 123 gaagacgtagwwgaagtccaaaamtacggtgacgawactagcgtgtcwtaaaaggatggc 182
|||||||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 410 gaagacgtagttgaagtccaaaactacggtgacgatactagcgtgtcttacaaggatggc 351
Query: 183 ctcacagaaagtgacgaagaagggcatcagawtaaatamaagamttgttcatggcagaaw 242
||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||| |
Sbjct: 350 ctcacagaaagtgacgaagaagggcatcagattaaatacaagacttgttcatggcagcat 291
Query: 243 actacaggattatkgactatcagaatacatcgtcctagccatcatgtcatttccatggkc 302
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 290 actacaggattattg-ctatcagaatacatcgtcctagccatcatgtcatttccatggtc 232
Query: 303 ttattcggtgttgggtttaattccgggacttatattgactgcatttgttgcaattaccgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttattcggtgttgggtttaattccgggacttatattgactgcatttgttgcaattaccgt 172
Query: 363 cttgtamacaggamttattgttttggaatatkgtgaacggttccctcatcttaaaratgt 422
|||||| |||||| ||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct: 171 cttgtacacaggacttattgttttggattattgtgaacggttccctcatcttaaaaatgt 112
Query: 423 gtgtgacattggacaamatctawtctggggcagcaaggctgcctggkatgcaamtgctgt 482
|||||||||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||
Sbjct: 111 gtgtgacattggacaacatctattctggggcagcaaggctgcctggtatgcaactgctgt 52
Query: 483 ttgcttcatagctaacaacacacttatccaagggttgcacgtcttggtcgg 533
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 ttgcttcatagctaacaacacacttatccaagggttgcacgtcttggtcgg 1
>3x_Contig1591
Length = 14045
Score = 152 bits (75), Expect = 8e-37
Identities = 130/147 (88%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 602 tcatttcatttgtgttttcaatcccaagaacattctcctcctatatctaaagttgcatac 661
||||||| ||||||||||| ||||||||||| ||| |||| ||| |||||||||||||||
Sbjct: 4591 tcatttcttttgtgttttctatcccaagaaccttcgcctc-tatgtctaaagttgcatac 4533
Query: 662 ttctcagctattaccatgttcatttcagttatcttggctatgatctttgctggaattcag 721
|||||||||||||||||||||||||| || || ||||||| ||||||| ||||| |||
Sbjct: 4532 ttctcagctattaccatgttcatttcggtaatactggctatcatctttgtaggaatccag 4473
Query: 722 gatcacccagctggctatgatggtact 748
|||||||| | ||| ||||||||||||
Sbjct: 4472 gatcacccggttggttatgatggtact 4446
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3379
Number of Sequences: 1807
Number of extensions: 3379
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 2
length of query: 766
length of database: 10,358,551
effective HSP length: 16
effective length of query: 750
effective length of database: 10,329,639
effective search space: 7747229250
effective search space used: 7747229250
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)